{"id":151237,"date":"2025-05-12T14:15:57","date_gmt":"2025-05-12T14:15:57","guid":{"rendered":"https:\/\/www.unipi.it\/ateneo\/organizzazione\/persone\/flavia-mascagni-121274-en\/"},"modified":"2026-04-01T04:45:47","modified_gmt":"2026-04-01T02:45:47","slug":"flavia-mascagni-121274-en","status":"publish","type":"unipi_persone","link":"https:\/\/www.unipi.it\/en\/about-us\/organisation\/people\/flavia-mascagni-121274-en\/","title":{"rendered":"Flavia Mascagni"},"content":{"rendered":"<p>Professoressa Associata &#8211; Dipartimento di Scienze Agrarie, Alimentari e Agro-ambientali | Tel.: 050 2216523 &#8211; Email: flavia.mascagni@unipi.it<\/p>\n","protected":false},"template":"","meta":{"unipi-persone-chiave":"121274","unipi-persone-nome":"Flavia","unipi-persone-cognome":"Mascagni","unipi-persone-email":"flavia.mascagni@unipi.it","unipi-persone-cv":"Born on June 1st, 1987 in La Spezia (Italy).<br \/>\r\nStudy data: 2012 Master's degree in Agricultural Biotechnology at the University of Florence, final mark 110\/110 with honor. 2016: PhD in Agriculture, Food and Environment from University of Pisa.<br \/>\r\nSince January 2025, she has been an associate professor of Plant Genetics at the Department of Agriculture, Food and Environment of the University of Pisa.<br \/>\r\nThe principal aim of her investigation is to characterise the non-coding component of the genomes of plants of commercial interest (such as sunflower, poplar, olive, fig and wheat) with a particular focus on the repetitive component and the emergence of new genes. The characterisation of repetitive DNA is of great relevance in plant science: not only to define genome structure more precisely but also to decipher the role of repetitive elements in the evolution of such species, clarifying aspects concerning plant domestication. Her research trajectory includes not only state-of-the-art bioinformatics analyses but also different in vitro assays to validate the outcomes of genomic searches. The research activity consisted of several research papers in ISI journals. <br \/>\r\nSince April 2024, she has been an Assistant Editor for Molecular Biology and Evolution.<br \/>\r\nShe is Review Editor for Plant Bioinformatics (specialty section of Frontiers in Plant Science) and ad hoc reviewer for several ISI journals: MBE, Scientific data, Genetica, BMC Genomics, and Planta.","unipi-persone-link-esterno-cv":"","unipi-persone-modalita-ricevimento":"La docente riceve tutti i giorni feriali previo appuntamento.\r\n","unipi-persone-luogo-ricevimento":"\r\n Edificio di Genetica del Dipartimento di Scienze Agrarie, Alimentari e Agro-ambientali, I piano \r\n","unipi-persone-ore-ricevimento":"\r\nTutti i giorni previo appuntamento\r\n","unipi-persone-telefono":"050 2216523","unipi-persone-sitoweb":"","unipi-persone-cariche":"","unipi-persone-link-orario-lezioni":"https:\/\/unipi.prod.up.cineca.it\/calendarioPubblico\/matricola=015404","unipi-persone-link-registro-lezioni":"https:\/\/unimap.unipi.it\/registri\/registri.php?ri=015404&tmplt=principale.tpl","unipi-persone-settore-scientifico":"Genetica Agraria AGRI-06\/A","unipi-persone-ruolo":"Professoressa Associata","unipi-persone-arpi":"https:\/\/arpi.unipi.it\/cris\/rp\/rp14222","unipi-persone-pubblicazioni":"<ul class=\"pubblicazioni-list\"><li><a href=\"https:\/\/arpi.unipi.it\/handle\/11568\/1322067\" target=\"_blank\" rel=\"noopener noreferrer\">Floor vegetation management affects the diversity and composition of mycorrhizal symbionts and soil microbial communities in a Mediterranean olive orchard<\/a> <span class=\"pub-details\">(Grassi, Arianna; Pagliarani, Irene; Granata, Eleonora; Avio, Luciano; Cristani, Caterina; Mascagni, Flavia; Giovannetti, Manuela; Piccini, Chiara; Cantini, Claudio; Turrini, Alessandra; Agnolucci, Monica - 2026 - 1.1 Articolo in rivista)<\/span><\/li><li><a href=\"https:\/\/arpi.unipi.it\/handle\/11568\/1354831\" target=\"_blank\" rel=\"noopener noreferrer\">Haplotype-resolved genome assembly of Ficus carica L. reveals allele-specific expression in the fruit<\/a> <span class=\"pub-details\">(Usai, Gabriele; Giordani, Tommaso; Vangelisti, Alberto; Castellacci, Marco; Simoni, Samuel; Bosi, Emanuele; Natali, Lucia; Mascagni, Flavia; Cavallini, Andrea - 2025 - 1.1 Articolo in rivista)<\/span><\/li><li><a href=\"https:\/\/arpi.unipi.it\/handle\/11568\/1282601\" target=\"_blank\" rel=\"noopener noreferrer\">Genome-Wide Characterization of Class III Peroxidases and Their Expression Profile During Mycorrhizal Symbiosis and Phosphorus Deprivation in Lettuce [Lactuca sativa L.]<\/a> <span class=\"pub-details\">(Simoni, Samuel; Castellacci, Marco; Usai, Gabriele; Rogo, Ugo; Mascagni, Flavia; Giordani, Tommaso; Natali, Lucia; Cavallini, Andrea; Vangelisti, Alberto - 2024 - 1.1 Articolo in rivista)<\/span><\/li><li><a href=\"https:\/\/arpi.unipi.it\/handle\/11568\/1233828\" target=\"_blank\" rel=\"noopener noreferrer\">Future-Proofing Agriculture: De Novo Domestication for Sustainable and Resilient Crops<\/a> <span class=\"pub-details\">(Rogo, U.; Simoni, S.; Fambrini, M.; Giordani, T.; Pugliesi, C.; Mascagni, F. - 2024 - 1.1 Articolo in rivista)<\/span><\/li><li><a href=\"https:\/\/arpi.unipi.it\/handle\/11568\/1233808\" target=\"_blank\" rel=\"noopener noreferrer\">Decoding the Genomic Landscape of Pomegranate: A Genome-Wide Analysis of Transposable Elements and Their Structural Proximity to Functional Genes<\/a> <span class=\"pub-details\">(Simoni, S.; Usai, G.; Vangelisti, A.; Castellacci, M.; Giordani, T.; Natali, L.; Mascagni, F.; Cavallini, A. - 2024 - 1.1 Articolo in rivista)<\/span><\/li><li><a href=\"https:\/\/arpi.unipi.it\/handle\/11568\/1233690\" target=\"_blank\" rel=\"noopener noreferrer\">Transcriptomic Analyses Reveal Insights into the Shared Regulatory Network of Phenolic Compounds and Steviol Glycosides in Stevia rebaudiana<\/a> <span class=\"pub-details\">(Simoni, Samuel; Vangelisti, Alberto; Clemente, Clarissa; Usai, Gabriele; Santin, Marco; Ventimiglia, Maria; Mascagni, Flavia; Natali, Lucia; Angelini, Luciana G.; Cavallini, Andrea; Tavarini, Silvia; Giordani, Tommaso - 2024 - 1.1 Articolo in rivista)<\/span><\/li><li><a href=\"https:\/\/arpi.unipi.it\/handle\/11568\/1238627\" target=\"_blank\" rel=\"noopener noreferrer\">Arbuscular symbiosis affects transcriptomic regulation of primary metabolism in leaves of soilless cultivated lettuces<\/a> <span class=\"pub-details\">(Vangelisti, Alberto; Simoni, Samuel; Cela, Fatjon; Avio, Luciano; Turrini, Alessandra; Sbrana, Cristiana; Incrocci, Luca; Pardossi, Alberto; Usai, Gabriele; Mascagni, Flavia; Ventimiglia, Maria; Natali, Lucia; Cavallini, Andrea; Giordani, Tommaso - 2023 - 1.1 Articolo in rivista)<\/span><\/li><li><a href=\"https:\/\/arpi.unipi.it\/handle\/11568\/1181180\" target=\"_blank\" rel=\"noopener noreferrer\">Genome-Wide Analysis of WOX Multigene Family in Sunflower [Helianthus annuus L.]<\/a> <span class=\"pub-details\">(Riccucci, Ettore; Vanni, Cosimo; Vangelisti, Alberto; Fambrini, Marco; Giordani, Tommaso; Cavallini, Andrea; Mascagni, Flavia; Pugliesi, Claudio - 2023 - 1.1 Articolo in rivista)<\/span><\/li><li><a href=\"https:\/\/arpi.unipi.it\/handle\/11568\/1181179\" target=\"_blank\" rel=\"noopener noreferrer\">Discovering the Repeatome of Five Species Belonging to the Asteraceae Family: A Computational Study<\/a> <span class=\"pub-details\">(Ventimiglia, Maria; Castellacci, Marco; Usai, Gabriele; Vangelisti, Alberto; Simoni, Samuel; Natali, Lucia; Cavallini, Andrea; Mascagni, Flavia; Giordani, Tommaso - 2023 - 1.1 Articolo in rivista)<\/span><\/li><li><a href=\"https:\/\/arpi.unipi.it\/handle\/11568\/1181176\" target=\"_blank\" rel=\"noopener noreferrer\">ASTER-REP, a Database of Asteraceae Sequences for Structural and Functional Studies of Transposable Elements<\/a> <span class=\"pub-details\">(Ventimiglia, M.; Bosi, E.; Vasarelli, L.; Cavallini, A.; Mascagni, F. - 2023 - 1.1 Articolo in rivista)<\/span><\/li><li><a href=\"https:\/\/arpi.unipi.it\/handle\/11568\/1162376\" target=\"_blank\" rel=\"noopener noreferrer\">A chromosome-length genome assembly and annotation of blackberry [Rubus argutus, cv. \u201cHillquist\u201d]<\/a> <span class=\"pub-details\">(Bruna, Tomas; Aryal, Rishi; Dudchenko, Olga; James Sargent, Daniel; Mead, Daniel; Buti, Matteo; Cavallini, Andrea; Hytonen, Timo; Andres, Javier; Pham, Melanie; Weisz, David; Mascagni, Flavia; Usai, Gabriele; Natali, Lucia; Bassil, Nahla; Fernandez, Gina E.; Lomsadze, Alexandre; Armour, Mitchell; Olukolu, Bode; Poorten, Thomas; Britton, Caitlin; Davik, Jahn; Ashrafi, Hamid; Lieberman Aiden, Erez; Borodovsky, Mark; Worthington, Margaret - 2023 - 1.1 Articolo in rivista)<\/span><\/li><li><a href=\"https:\/\/arpi.unipi.it\/handle\/11568\/1162374\" target=\"_blank\" rel=\"noopener noreferrer\">Genome-wide identification and characterization of exapted transposable elements in the large genome of sunflower [Helianthus annuus L.]<\/a> <span class=\"pub-details\">(Ventimiglia, Maria; Marturano, Giovanni; Vangelisti, Alberto; Usai, Gabriele; Simoni, Samuel; Cavallini, Andrea; Giordani, Tommaso; Natali, Lucia; Zuccolo, Andrea; Mascagni, Flavia - 2023 - 1.1 Articolo in rivista)<\/span><\/li><li><a href=\"https:\/\/arpi.unipi.it\/handle\/11568\/1162372\" target=\"_blank\" rel=\"noopener noreferrer\">Haplotype-phased genome assembly for Ficus carica breeding<\/a> <span class=\"pub-details\">(Giordani, T.; Usai, G.; Castellacci, M.; Vangelisti, A.; Mascagni, F.; Ventimiglia, M.; Simoni, S.; Natali, L.; Cavallini, A. - 2022 - 1.1 Articolo in rivista)<\/span><\/li><li><a href=\"https:\/\/arpi.unipi.it\/handle\/11568\/1162370\" target=\"_blank\" rel=\"noopener noreferrer\">Identification and expression analysis of furanocoumarins- and terpenoids-related genes of fig [Ficus carica L.]<\/a> <span class=\"pub-details\">(Usai, Gabriele; Vangelisti, Alberto; Simoni, Samuel; Mascagni, Flavia; Venturi, Francesca; Natali, Lucia; Giordani, Tommaso; Palai, Giacomo; Pugliesi, Claudio; D\u2019Onofrio, Claudio; Cavallini, Andrea - 2022 - 1.1 Articolo in rivista)<\/span><\/li><li><a href=\"https:\/\/arpi.unipi.it\/handle\/11568\/1155684\" target=\"_blank\" rel=\"noopener noreferrer\">The Singular Evolution of Olea Genome Structure<\/a> <span class=\"pub-details\">(Mascagni, F.; Barghini, E.; Ceccarelli, M.; Baldoni, L.; Trapero, C.; Diez, C. M.; Natali, L.; Cavallini, A.; Giordani, T. - 2022 - 1.1 Articolo in rivista)<\/span><\/li><\/ul>","unipi-persone-didattica":"<ul class=\"registri-list\"><li>Bioinformatica (cod. 303GG) per Laurea Magistrale in Biotecnologie vegetali e microbiche<\/li><li>Biotecnologie genetiche (cod. 301GG) per Laurea Magistrale in Biotecnologie vegetali e microbiche<\/li><\/ul>","unipi-persone-codocenze":"","unipi-persone-interessi-ricerca":"","_wpml_word_count":"21","_last_translation_edit_mode":"translation-editor","_elementor_page_assets":[]},"organizzazioni":[3720],"class_list":["post-151237","unipi_persone","type-unipi_persone","status-publish","hentry","organizzazioni-dipartimento-di-scienze-agrarie-alimentari-e-agro-ambientali-569999-en"],"email":"flavia.mascagni@unipi.it","telefono":"050 2216523","content_plain":"Professoressa Associata &#8211; Dipartimento di Scienze Agrarie, Alimentari e Agro-ambientali | Tel.: 050 2216523 &#8211; Email: flavia.mascagni@unipi.it","photo_url":null,"ruoli_tags":[{"id":759,"name":"PA","slug":"pa"}],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v27.0 - https:\/\/yoast.com\/product\/yoast-seo-wordpress\/ -->\n<title>Flavia Mascagni ~ UNIPI<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/www.unipi.it\/en\/about-us\/organisation\/people\/flavia-mascagni-121274-en\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Flavia Mascagni ~ UNIPI\" \/>\n<meta property=\"og:description\" content=\"Professoressa Associata &#8211; 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